Blog List

Monday, 19 June 2017

Cantharellus (Cantharellales, Basidiomycota) revisited in Europe through a multigene phylogeny

Published Date
Volume 83, Issue 1pp 263–292

DOI: 10.1007/s13225-016-0376-7
Cite this article as:
Olariaga, I., Moreno, G., Manjón, J.L. et al. Fungal Diversity (2017) 83: 263. doi:10.1007/s13225-016-0376-7
Author
  • Ibai Olariaga
  • Gabriel Moreno
  • Jose Luis Manjón
  • Isabel Salcedo
  • Valérie Hofstetter
  • Diego Rodríguez
  • Bart Buyck
Abstract
Resolving species delimitation issues of European Cantharellus is crucial to correctly name chanterelles around the globe. Thirty names referring to Cantharellus s. str. have been described in Europe, some of which are used in other continents. Based on combined analyses of ITS2, LSU, RPB2 and TEF-1, merely eight species are here recognized in Europe applying the genealogical concordance phylogenetic species recognition criteria, one of which, C. roseofagetorum, is described as new. Morphological characters used in species delimitation are mapped and their variability evaluated. The colour of the hymenophore in young specimens is found to be a rather constant morphological character of taxonomic use. European species of Cantharellus are morphologically distinguished by unique combinations of characters, such as the presence of a pink pileal coating, pileus and hymenophore colour when young, and in some cases, the mean spore length and ecology. Eighteen type specimens from Europe are sequenced. Based on revised species concepts sixteen novel taxonomic synonyms are here proposed for European chanterelles: C. alborufescens (= C. henriciC. ilicisC. lilacinopruinatus), C. amethysteus (= C. cibarius subsp. squamulosusC. cibarius var. umbrinus, C. rufipes), C. cibarius (= C. cibarius var. atlanticusC. parviluteus), C. ferruginascens (= C. cibarius var. flavipes), C. friesii (= C. ignescens), C. pallens (= C. cibarius var. albidusC. cibarius var. bicolorC. subpruinosus), and C. romagnesianus (= C. pseudominimusC. lourizanianusC. romagnesianus var. parvisporus). The type of CantharellusC. cibarius, is epitypified. Descriptions, colour illustrations and a key to all European species are provided.

References
  1. Anonymous (1888) Botanik. Naturae Novit 10:114–116Google Scholar
  2. Anonymous (1989) Le Cantharellaceae del Vicentino. Riv Micol 32(5–6):212–225Google Scholar
  3. Ariyawansa HA et al (2015) Fungal diversity notes 111–252: taxonomic and phylogenetic contributions to fungal taxa. Fungal Divers 75(1):27–274CrossRefGoogle Scholar
  4. Artsdatabanken (2016) Ametystkantarell Cantharellus amethysteus (Quél.) Sacc. http://data.artsdatabanken.no/Taxon/39021. Accessed 5 April 2016
  5. Becerra M, Robles E (2009) Cantharellus lilacinopruinatus Hermitte, Eyssart. & Poumarat (Cantharellales), nueva cita para Andalucía. Acta Bot Malacitana 34:1–2Google Scholar
  6. Blanco-Dios JB (2004) Notas sobre la familia Cantharellaceae en el noroeste de la Península Ibérica (I). Bol Soc Micol Madrid 28:181–185Google Scholar
  7. Blanco-Dios JB (2011) Notas sobre la familia Cantharellaceae en el noroeste de la Península Ibérica (III): Cantharellus lourizanianus y C. romagnesianus var. parvisporus, dos nuevos taxones del subgénero Parvocantharellus, y Craterellus lutescens f. citrinosulphureus, f. nov. Tarrelos 13:7–15Google Scholar
  8. Buyck B (2014) Exploring the diversity of “smooth” chanterelles (Cantharellus, Cantharellales). Cryptogam Mycol 35(1):23–40CrossRefGoogle Scholar
  9. Buyck B, Hofstetter V (2011) The contribution of tef-1 sequences to species delimitation in the Cantharellus cibarius species complex in the southeastern USA. Fungal Divers 49:35–46CrossRefGoogle Scholar
  10. Buyck B, Cruaud C, Couloux A, Hofstetter V (2011) Cantharellus texensis sp. nov. from Texas, a southern lookalike of C. cinnabarinus revealed by tef-1 sequence data. Mycologia 103:1037–1046CrossRefPubMedGoogle Scholar
  11. Buyck B, Kauff F, Eyssartier G, Couloux A, Hofstetter V (2014) A multilocus phylogeny for worldwide Cantharellus (Cantharellales, Agaricomycetidae). Fungal Divers 64(1):101–121CrossRefGoogle Scholar
  12. Buyck B, Kauff F, Randrianjohany E, Hofstetter V (2015) Sequence data reveal a high diversity of Cantharellus associated with endemic vegetation in Madagascar. Fungal Divers 70(1):189–208CrossRefGoogle Scholar
  13. Constantino C, Siquier JL (1996) Els Bolets de les Balears. Micobalear, MallorcaGoogle Scholar
  14. Contu M, Vizzini A, Carbone M, Setti L (2009) Identity and neotypification of Craterellus cinereus and description of Cantharellus atrofuscus sp. nov. Mycotaxon 110:139–149CrossRefGoogle Scholar
  15. Cooke MC (1889) Handbook of British fungi, ed 2, part 3. MacMillan and co, London, pp 289–344
  16. Corner EJH (1966) A monograph of cantharelloid fungi. Ann Bot Mem 2:1–255Google Scholar
  17. Dahlman M, Danell E, Spatafora JW (2000) Molecular systematics of Craterellus: cladistic analysis of nuclear LSU rDNA sequence data. Mycol Res 104(4):388–394CrossRefGoogle Scholar
  18. Dettman JR, Jacobson DJ, Taylor JW (2003) A multilocus genealogical approach to phylogenetic recognition in the model eukaryote Neurospora. Evolution 57(12):2703–2720CrossRefPubMedGoogle Scholar
  19. Dunham SM, O’Dell TE, Molina R (2003) Analysis of nrDNA sequences and microsatellite allele frequencies reveal a cryptic chanterelle species Cantharellus cascadensis sp. nov. from the American Pacific Northwest. Mycol Res 107:1163–1177CrossRefPubMedGoogle Scholar
  20. Earle FS (1909) The genera of the North American Fungi. Bull New York Bot Gard 5(18):373–451Google Scholar
  21. Eyssartier G (2001) Vers une monographie du genre Cantharellus Adans.:Fr. Dissertation, Museum national d’histoire naturelle, Paris
  22. Eyssartier G, Buyck B (2000) Le genre Cantharellus en Europe. Nomenclature et taxinomie. Bull Soc Mycol France 116(2):91–137
  23. Eyssartier G, Roux P (2011) Le guide des champignons—France et Europe. Editions Belin, ParisGoogle Scholar
  24. Eyssartier G, Buyck B, Hériveau P (1998) Quelques taxons intéressants Récoltés en Dordogne. Contribution nº 22 au Programme national d’inventaire et de cartographie des Mycota français. Bull Soc Mycol France 114(3):35–42
  25. Fayod MV (1889) Prodrome d’une histoire naturelle des agaricinés. Ann Sci Nat, sér 7 Bot 9:181–411Google Scholar
  26. Fayod V (1893) [1892] Censimenti dei funghi observati nelle valli valdesi del Piedimonte, durante i mesi di agosto-ottobre del 1885–87. Ann Real Accad Agric Torino 35:81–114
  27. Feibelman TP, Bayman P, Cibula WG (1994) Length variation in the internal transcribed spacer of ribosomal DNA in chanterelles. Mycol Res 98:614–618CrossRefGoogle Scholar
  28. Feibelman TP, Bennett JW, Cibula WG (1996) Cantharellus tabernensis: a new speces from southeastern United States. Mycologia 8(2):295–301CrossRefGoogle Scholar
  29. Fernández-Sasia R, Pérez-De-Gregorio MÀ, Eyssartier G (2003) Cantharellus parviluteus, une nouvelle espèce dècrite de la Péninsule Ibérique. Bull Soc Mycol France 119(3–4):261–266Google Scholar
  30. Ferry R (1892) Quelques excursions mycologiques dans la Montagne-Noire, les Pyrénées et les Alpes, 1891. Rev Mycol (Toulouse) 14:79–82Google Scholar
  31. Foltz MJ, Perez ME, Volk TJ (2013) Molecular phylogeny and morphology reveal three new species of Cantharellus within 20 m of one another in western Wisconsin, USA. Mycologia 105(2):447–461CrossRefPubMedGoogle Scholar
  32. Fries EM (1821) Systema mycologicum. I. Lund, BerlinGoogle Scholar
  33. Fries EM (1874) Hymenomycetes europaei. Uppsala
  34. Fuckel L (1870) [1869–1870] Symbolae mycologicae. Jahrb. Nassauischen Vereins Naturk. 23–24:1–459
  35. GBIF (2016) Secretariat: GBIF Backbone Taxonomy, 2013-07-01. Accessed 4 April 2016
  36. Gillet CC (1878) Les Champignons qui croissent en France. Description et iconographie, propiétés utiles ou vénéneuses. J.B. Baillère & fils, Paris
  37. Gillet CC (1884) Tableaux analytiques des hyménomycètes de France. Typographie et Litographie A. Lepage, AlençonGoogle Scholar
  38. Gillet CC (1897) Champignons de France. Les Hyménomycètes. Imprimerie Commerciale et Administrative A. Herpin, AlençonGoogle Scholar
  39. Hermitte J-C, Eyssartier G, Poumarat S (2005) Cantharellus lilacinopruinatus sp. nov., une nouvelle chanterelle thermophile. Bull Sem Fed Assoc Mycol Médit 28:27–33Google Scholar
  40. Hillis DM, Bull JJ (1993) An empirical test of bootstrapping as a method for assessing confidence in phylogenetic analyses. Syst Biol 42:182–192CrossRefGoogle Scholar
  41. Hillis DM, Dixon MT (1991) Ribosomal DNA: molecular evolution and phylogenetic inference. Q Rev Biol 66:411–453CrossRefPubMedGoogle Scholar
  42. Kornerup A, Wanscher JH (1961) Farver i farver. Politikens forlag, KøbenhavnGoogle Scholar
  43. Krieglsteiner J (2000) Die Großpilze Baden-Württembergs, Band 2. Spezieller Teil: Ständerpilze: Leisten-, Keulen-, Korallen- und Stoppelpilze, Bauchpilze, Röhrlings- und Taublingsartige. Ulmer, Germany
  44. Kumari D, Reddy MS, Upadhyay RC (2013) New records of Cantharellus species from the northwestern Himalayas of India. Mycology 4(4):205–220CrossRefGoogle Scholar
  45. Kumari D, Upadhyay RC, Reddy MS (2011) Cantharellus pseudoformosus, a new species associated with Cedrus deodara from India. Mycoscience 52(2):147–151CrossRefGoogle Scholar
  46. Lange C (1998) Ametyst kantarell og andre kantareller i Danmark. Svampe 38:1–6Google Scholar
  47. Largent DL, Sime AD (1995) A preliminary report on the phenology, sporulation and lifespan in Cantharellus cibarius and Boletus edulis basidiomes in Patrick’s Point State Park. In: Adams DH, Rios JE, Stere AJ (ed) Symposium proceedings, 43rd annual meeting of the California Forest Pest Council. Sacramento, pp 32–44
  48. Larsson A (2014) AliView: a fast and lightweight alignment viewer and editor for large data sets. Bioinformatics. doi:10.1093/bioiPubMedCentralGoogle Scholar
  49. Liu JK et al (2015) Fungal Diversity Notes 1–110: taxonomic and phylogenetic contributions to fungal species. Fungal Divers 72:1–197CrossRefGoogle Scholar
  50. Maire R (1937) Fungi Catalaunici series altera. Contribution à l étude de la Flore Mycologique de la Catalogne. Treb Mus Cièn Nat 3(4):1–128
  51. Malençon G, Bertault R (1975) Flore des champignons superieurs du Maroc. Trav Inst Sci Chérifien, Sér Bot Biol Vég 33:1–539Google Scholar
  52. Mason-Gamer RJ, Kellogg EA (1996) Testing for phylogenetic conflict among molecular data sets in the tribe Triticeae (Graminaeae). Syst Biol 45:524–545CrossRefGoogle Scholar
  53. Michelland S (1990) Cantharellus cibarius variété neglectus. Bull Féd Myc Dauphiné-Savoie 118:33Google Scholar
  54. Miller MA, Pfeiffer W, Schwartz T (2010) Creating the CIPRES science gateway for inference of large phylogenetic trees. In: Proceedings of the 1st conference extreme science and engineering discovery environment, pp 1–8
  55. Moncalvo J-M, Nilsson RH, Koster B, Dunham SM, Bernauer T, Matheny PB, Porter TM, Margaritescu S, Weib M, Danell E, Langer G, Langer E, Larsson E, Larsson K-H, Vilgalys R (2006) The cantharelloid clade: dealing with incongruent gene trees and phylogenetic reconstruction methods. Mycologia 98:937–948CrossRefPubMedGoogle Scholar
  56. Morehouse EA, James TY, Ganley ARD, Vilgalys R, Berger L, Murphy PJ, Longcore JE (2003) Multilocus sequence typing suggests the chytrid pathogen of amphibians is a recently emerged clone. Mol Ecol 12:395–403CrossRefPubMedGoogle Scholar
  57. Müller K (2005) SeqState—primer design and sequence statistics for phylogenetic DNA data sets. App Bioinform 4:65–69CrossRefGoogle Scholar
  58. Norvell LL (1995) Loving the chanterelle to death? The ten-year Oregon chanterelle project. McIlvainea 12:6–25Google Scholar
  59. O’Donnell K, Rooney AP, Mills GL, Kuo M, Weber NS, Rehner S (2011) Phylogeny and historical biogeography of true morels (Morchella) reveals and early Cretaceous origin and high continental endemism and provincialism in the Holarctic. Fungal Phyl Biol 48:252–265
  60. Olariaga I (2009) The order Cantharellales in the Iberian Peninsula and the Balearic Islands. Dissertation, Euskal Herriko Unibertsitatea (UPV/EHU)
  61. Olariaga I, Salcedo I (2009) [2008] Cantharellus ilicis sp. nov., a new species from the Mediterranean basin collected in evergreen Quercus forests. Bol Soc Micol Catalana 30:107–116
  62. Olariaga I, Buyck B, Esteve-Raventós F, Hofstetter V, Manjón JL, Moreno G, Salcedo I (2015) Assessing the taxonomic identity of white and orange specimens of Cantharellus: occassional colour variants or independent species? Cryptogam Mycol 36(3):287–300CrossRefGoogle Scholar
  63. Orton PD (1969) Notes on British agarics: III. Notes R Bot Gard Edinburgh 29(1):75–127Google Scholar
  64. Papetti C, Alberti S (1998) Val Carobbio (S. Eufemia, Brescia) un´appendice mediterranea in citta. Boll Circ Micol G Carini 36:25–30Google Scholar
  65. Pegler DN, Roberts PJ, Spooner BM (1997) British chanterelles and tooth-fungi. Royal Botanic Gardens, KewGoogle Scholar
  66. Peltereau M (1898) Notes bibliographiques sur l’oeuvre de M. Gillet, “Champignons de France”. Bull Soc Mycol France 14:156–160Google Scholar
  67. Pérez-De-Gregorio MÀ, Mir G (2006) Cantharellus lilacinopruinatus Hermitte, Eyssart. & Poumarat, a Catalunya i les illes Balears. Rev Catalana Micol 28:115–117Google Scholar
  68. Persson O, Mossberg B (1994) Kantareller. Rolland Repro, SolnaGoogle Scholar
  69. Petersen RH (1971) Interfamilial relationships in the clavarioid and cantharelloid fungi. In: Petersen RH (ed) Evolution in the higher Basidiomycetes. Knoxville, pp 345–374
  70. Petersen R (1979) Notes on cantharelloid fungi. IX. Illustrations of new or poorly understood taxa. Nova Hedwigia 32(1–2):1–23Google Scholar
  71. Pilát A (1959) Cantharellus cibarius Fr. und Cantharellus pallens sp. n. Omagiu lui Traian. Săvulescu 597–600
  72. Pilz D, Norvell L, Danell E, Molina R (2003) Ecology and management of commercially harvested chanterelle mushrooms. Pacific Northwest Research Station, PortlandCrossRefGoogle Scholar
  73. Quélet L (1883) [1882] Quelques espèces critiques ou nouvelles de la Flore Mycologique France. Compt Rend Assoc Franc Avancem Sci 11:387–412
  74. Quélet L (1888) Flore Mycologique de la France et des pays limitrophes. Octave Doin, ParisGoogle Scholar
  75. Rambaut A, Suchard MA, Xie D (2013) Tracer v1.5. Available from http://beast.bio.ed.ac.uk/Tracer
  76. Redhead SA, Norvell L, Danell E (1997) Cantharellus formosus and the Pacific golden chanterelle harvest in western North America. Mycotaxon 65:285–322Google Scholar
  77. Ricek EW (1971) Cantharellus cibarius var. amethysteus Quél. Schweiz Z Pilzk 49:71–72Google Scholar
  78. Romagnesi H (1995) Prodrome a une flore analytique des Hymenomycetes agaricoides III. Fam. Cantharellaceae Schoeter Doc Mycol 25(98–100):417–424Google Scholar
  79. Ronquist F, Teslenko M, Van der Mark P, Ayres D, Darling A, Höhna S, Larget B, Liu L, Suchard MA, Huelsenbeck JP (2012) MrBayes 3.2: Efficient Bayesian phylogenetic inference and model choice across a large model space. Syst Biol 61:539–542CrossRefPubMedPubMedCentralGoogle Scholar
  80. Rostrup E (1905) [1904] Norges Hymenomyceter af Axel Blytt. Vidensk-Selsk Christiana Skrift Math-Naturvet kl 6:1–164
  81. Roux P, Eyssartier G (2013) Le guide des champignons. France et Europe, BelinGoogle Scholar
  82. Ryman S, Holmåsen I (1984) Svampar. Interpublishing AB, StockholmGoogle Scholar
  83. Saccardo PA (1912) Sylloge fungorum XXI. Typis Seminarii, PaduaGoogle Scholar
  84. Schmitt T (2009) Biogeographical and evolutionary importance of the European high mountain systems. Front Zool 6:9CrossRefPubMedPubMedCentralGoogle Scholar
  85. Schoch CL, Seifert KA, Huhndorf S, Robert V, Spouge JL, Levesque CA, Chen W, Fungal Barcoding Consortium (2012) Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi. Proc Natl Acad Sci USA 109:6241–6246. doi:10.1073/pnas.1117018109CrossRefPubMedPubMedCentralGoogle Scholar
  86. Shao SC, Buyck B, Hofstetter V, Tian XF, Geng YH, Yu FQ, Liu PG (2014) Cantharellus hygrophorus, a new species in subgenus Afrocantharellus from tropical southwestern China. Cryptogam Mycol 35:283–291CrossRefGoogle Scholar
  87. Shao S-C, Liu P-G, Tian X-F, Buyck B, Geng Y-H (2016) A new species of Cantharellus (Cantharellales, Basidiomycota, Fungi) from subalpine forest in Yunnan, China. Phytotaxa 252(4):273–279CrossRefGoogle Scholar
  88. Simmons MP, Ochoterena H (2000) Gaps as characters in sequence-based phylogenetic analyses. Syst Biol 49:369–381CrossRefPubMedGoogle Scholar
  89. Souché M (1904) Sur le Cantharellus cibarius Fr., forme C. neglectus. Bull Trimest Soc Mycol France 20:39
  90. Stafleu FA, Cowan RS (1976) Taxonomic literature, vol 1. A-G. Bohn, Skeltema & Holkema, UtrechtGoogle Scholar
  91. Stamatakis A (2006) Raxml-VI-HPC: maximum likelihood based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22:2688–2690CrossRefPubMedGoogle Scholar
  92. Taylor JW, Jacobson DJ, Kroken S, Kasuga T, Geiser DM, Hibbett DS, Fisher MC (2000) Phylogenetic species recognition and species concepts in fungi. Fung Gen Biol 31:21–32CrossRefGoogle Scholar
  93. Thiers B (2016) [continuously updated] Index Herbariorum: A global directory of public herbaria and associated staff. New York Botanical Garden’s Virtual Herbarium, http://sweetgum.nybg.org/ih/. Accessed April 2016
  94. Tibuhwa DD, Savić S, Tibell L, Kivaisi AK (2012) Afrocantharellus gen. stat. nov. is part of a rich diversity of African Cantharellaceae. IMA Fungus 3(1):25–38
  95. Vilgalys R, Hester M (1990) Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. J Bact 172:4238–4246CrossRefPubMedPubMedCentralGoogle Scholar
  96. White TJ, Bruns T, Lee S, Taylor J (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Inns MA, Gelfand DH, Sninsky JJ, White TJ (eds) PCR protocols: a guide to methods and applications. Academic Press, London, pp 315–322Google Scholar
For further details log on website :
https://link.springer.com/article/10.1007/s13225-016-0376-7

No comments:

Post a Comment

Advantages and Disadvantages of Fasting for Runners

Author BY   ANDREA CESPEDES  Food is fuel, especially for serious runners who need a lot of energy. It may seem counterintuiti...