Sunday, 27 November 2016



Noor K. Kartikawati


Information about fertility variation of flowering trees in seed orchard including determining the quality of seed production and estimating the genetic diversity are still lacking. This paper evaluates fertility variation, effective population size and genetic diversity among cajuput trees in seedling seed orchard at Paliyan, Gunungkidul for optimizing seed orchard management. A total of 160 trees were observed in three flowering periods of 2011-2013. The fertility based on the number of flowers and fruits were registered for each tree at the age of 12, 13 and 14 years. Results show that there are similar patterns of fertility after three years observation. Sibling coefficients (Ψ) which show fertility variation during three flowering periods are 1.39, 1.25 and 1.43 respectively. They show deviation from random mating, because of individual imbalance for producing flowers and fruits. However, the number of fertile trees was comparatively higher at 2011. More than 15 families of effective population size were recorded each year and supported more than 75% individuals in seed orchard to contribute flowers and seeds. High value of genetic diversity was calculated based on fertility variation (0.965, 0.967 and 0.957, respectively). Fertility variation led to consequence on seed deployment, including seeds of fertile families which should be collected equally and mixed to compose equal proportion of seeds and to avoid domination of highly fertility families and genetic drift. Silvicultural treatments in seed orchard management were indispensable to promote fertility uniformity and to increase effective population size in seed orchard for obtaining maximal genetic gain.


Melaleuca cajuputi; seed orchard; fertility variation; genetic diversity

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Baskorowati, L., Moncur, M. W., Cunningham, S. A., Doran, J. C., & Kanowski, P. J. (2010). Reproductive biology of Melaleuca alternifolia ( Myrtaceae ) 2 . Incompatibility and pollen transfer in relation to the breeding system, (1984), 384–391.
Bila, A.D., Lindgren, D & Mullin, T. J. (1999). Fertility variation and its effect on diversity over generation in a teak plantation (Tectona grandis L.f). Silvae Genetica, 48, 109–114.
Bilir, N., & Temiraga, H. (2012). Fertility Variation and Status Number in Clonal Seed Orchard of Pinus sylvestris. Pakistan Journal of Biological Sciences, 15(22), 1075–1079.
Bilir, N., Kang, K. S., & Ozturk, H. (2002). Fertility variation and gene diversity in clonal seed orchards of Pinus brutia, Pinus nigra and Pinus sylvestris in Turkey. Silvae Genetica, 51(2-3), 112–115.
Brophy, J., Craven, L.A., & Doran, J. C. (2013). Melaleucas. Their Botany, essential oils and users. (-, Ed.). Canberra: ACIAR Monograph N0 156. Australian Centre for International Agricultural Research.
Chen, Y. Y., & Hsu, S. B. (2011). Synchronized reproduction promotes species coexistence through reproductive facilitation. Journal of Theoretical Biology, 274(1), 136–144.
Cherry, M. L., Anekonda, T. S., Albrecht, M. J., & Howe, G. T. (2007). Flower stimulation in young miniaturized seed orchards of Douglas-fir (Pseudotsuga menziesii). Canadian Journal of Forest Research-Revue Canadienne De Recherche Forestiere, 37(1), 1–10.
Codesido, V., & Fernandez-Lopez, J. (2014). Juvenile radiata pine clonal seed orchard management in Galicia (NW Spain). European Journal of Forest Research, 133(1), 177–190.
Dinas Tanaman pangan dan Perikanan. (2012). Data Curah Hujan Kabupaten Gunungkidul. Gunungkidul.
Dinas Tanaman pangan dan Perikanan. (2013). Data Curah Hujan Kabupaten Gunungkidul. Gunung Kidul.
Doran, J.C., Rimbawanto, A., Gunn, B.V., & Nirsatmanto, A. (1998). Breeding Plan for Melaleuca cajuputi subsp.cajuputi in Indonesia. (-, Ed.) (- ed.). Indonesia: CSIRO Forestry and Forest Product, Australia Tree Seed Centre and Forest Tree Improvement Research and Development Institute.
Ertekin, M. (2010). Clone Fertility and Genetic Diversity in a Black Pine Seed Orchard. Silvae Genetica, 4(December 2008), 145–150.
Gates, D. J., & Nason, J. D. (2012). Flowering asynchrony and mating system effects on reproductive assurance and mutualism persistence in fragmented fig-fig wasp populations. American Journal of Botany, 99(4), 757–768.
Giménez-Benavides, L., García-Camacho, R., Iriondo, J. M., & Escudero, A. (2010). Selection on flowering time in Mediterranean high-mountain plants under global warming. Evolutionary Ecology, 25(4), 777–794.
Gömöry, D., Bruchanik, R., & Paule, L. (2000). Effective Populatinumber estimation of three Scots pine (Pinus sylvestris L.) seed orchards based on an integrated assessment of flowering, floral phenology, and seed orchard. Forest Genetics, 7(1), 65–75. Retrieved from
Kamalakannan, R., Varghese, M., & Lindgren, D. (2007). Fertility variation and its implications on relatedness in seed crops in seedling seed orchard of Eucalyptus camaldulensis and E tereticornis. Silvae Genetica, 56(6), 253–259.
Kang, K.S., & Kim, C. S. (2012). Clonal fertility variation and its effect on the effective population size in the seed orchard of dioucious species, Fraxinus rhynchophylla. Silvae Genetika, 61, 79–85.
Kang, K. ., & Lindgren, D. (1999). Fertility variation among clones of Korean pine (Pinus koraiensis S. et Z.) and its implications on seed orchard management. For. Genet, 6(3), 191–200. Retrieved from
Kang, K. S., Bila, A. D., Harju, A. M., & Lindgren, D. (2003). Estimation of fertility variation in forest tree populations. Forestry, 76(3), 329–344.
Kang, K. S., & El-Kassaby, Y. A. (2002). Considerations of correlated fertility between genders on genetic diversity: The Pinus densiflora seed orchard as a model. Theoretical and Applied Genetics, 105(8), 1183–1189.
Kang, K. S., El-Kassaby, Y. A., Chung, M. S., Kim, C. S., Kang, Y. J., & Kang, B. S. (2005). Fertility variation and genetic diversity in a clonal seed orchard of Cryptomeria japonica. Silvae Genetica, 54(3), 104–107.
Kang, K. S., Lindgren, D., & Mullin, T. J. (2001). Prediction of genetic gain and gene diversity in seed orchard crops under alternative management strategies. Theoretical and Applied Genetics, 103(6-7), 1099–1107.
Kang, K. S., & Mullin, T. J. (2007). Variation in clone fertility and its effect on the gene diversity of seeds from a seed orchard of Chamaecyparis obtusa in Korea. Silvae Genetica, 56(3-4), 134–137.
Kartikawati, N.K. (2015). Indeks overlap dan sinkroni pembungaan dalam kebun benih kayuputih Paliyan, Gunungkidul. Jurnal Pemuliaan Tanaman Hutan, 9(2), 103–115.
Kartikawati, N. ., Naiem, M., Hardiyanto, & Rimbawanto, A, (2013). Improvement of Seed Orchard Management Based on Mating System of Cajuputi Trees. Indonesian Journal of Biotechnology, 18(I), 26–35.
Lai, B. S., Funda, T., Liewlaksaneeyanawin, C., Kl, J., Van, A., Annette, V. N., … Jack, W. (2010). Pollination dynamics in a Douglas-fir seed orchard as revealed by pedigree reconstruction. Annals of Forest Science.
Lawande, K. E., Haldankar, P. M., Dalvi, N. V., & Parulekar, Y. R. (2014). Effect of Pruning on Flowering and Yield of Jamun cv. Konkan Bahadoli. Journal of Plant Studies, 3(1), 114–118.
Lesica, P., & Kittelson, P. M. (2010). Precipitation and temperature are associated with advanced flowering phenology in a semi-arid grassland. Journal of Arid Environments, 74(9), 1013–1017.
Lindgren, D., & Mullin, T. . (1998). Relatedness and Status Number in Seed Orchard Crops. Canadian Journal of Forest Research, 28, 276–283.
Machanská, E., Bajcar, V., Longauer, R. ., & Gömöry, D. (2013). Effective population size estimation in seed orchards: A case study of Pinus nigra ARNOLD and Fraxinus excelsior L./ F. angustifolia VAHL. Genetika, 45(2), 575–588.
Sumardi. (2011). Fertility Variation and Effective Population Size. Journal of Forest, 7(7), 66–79.
Susanto, M., Doran, J., Arnold, R., & Rimbawanto, A. (2003). Genetic Variation in Growth and Oil Characteristic of Melaleuca Subsp. and Potential Fr Genetic Improvement. Journal of Tropical Forest Science, 15(3), 469–482.
Swain, T. L., Verryn, S. D., & Laing, M. D. (2013). A comparison of the effect of genetic improvement, seed source and seedling seed orchard variables on progeny growth in Eucalyptus nitens in South Africa. Tree Genetics and Genomes, 9(3), 767–778.
Varghese, M., Nicodemus, A., Nagarajan, B., & Lindgren, D. (2006). Impact of fertility variation on gene diversity and drift in two clonal seed orchards of teak (Tectona grandis Linn. f.). New Forests, 31(3), 497–512.
Varghese, M., Kamalakannan, R., Harwood, C. E., Lindgren, D., & McDonald, M. W. (2009). Changes in growth performance and fecundity of Eucalyptus camaldulensis and E. tereticornis during domestication in southern India. Tree Genetics and Genomes, 5(4), 629–640.
Varghese, M., Kamalakannan, R., Nicodemus, A., & Lindgren, D. (2008). Fertility variation and its impact on seed crops in seed production areas and a natural stand of teak in southern India. Euphytica, 160(1), 131–141.
Varghese, M., Ravi, N., Gu Son, S., & Lindgren, D. (2003). Variation in Fertility and its impact on Genetic Diversity in a seedling seed orchard of Eucalyptus tereticornis. In Proceeding of Symposium Eucalyptus Plantation Research, Management and Development (p. -). Singapore: World Scientific Publishing Co.Pte.Ltd.
Young, A., Boshier, D., & Boyle, T. (2000). Forest Conservation Genetics: Principles and Practises. Collingwood: CSIRO Publishing.


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