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Sunday 4 September 2016

Mating System and Gene Flow of Dipterocarps Revealed by Genetic Markers

Author

  • Yoshihiko Tsumura
  • Tokuko Ujino-Ihara
  • Kyoko Obayashi
  • Akihiro Konuma
  • Teruyoshi Nagamitsu


  • Abstract

    Tropical rain forests are becoming fragmented into small patches and simplified in structure and composition due to their exploitation for timber. Consequently, genetic variation may be decreased and the genetic differentiation between the patches may rise. Developing sustainable forestry regimes that retain genetic diversity is one of the major goals in tropical forestry today. Tropical tree species have predominantly allogamous mating systems, mediated by many kinds of pollinators, so the gene flow through pollen and seeds is one of the most important factors influencing genetic diversity in tropical forests. Recently, molecular markers have been used to determine the genetic diversity and differentiation of forest tree populations. In particular, microsatellite DNA markers, which are highly polymorphic, have been used to evaluate the gene flow through pollen and seeds within forests. We have also developed microsatellite DNA markers in dipterocarp species, and used these markers to analyze mating systems, genetic structures and gene flow in several dipterocarp species at ecological parmanent plots such as those in Pasoh Forest Reserve (Pasoh FR). We discuss, here, characteristics of the pollination and breeding systems in dipterocarps that have been revealed by microsatellite analysis, and the factors that influence them. Finally, the potential value and limitations of using molecular approaches to develop genetic criteria for gene conservation in sustainable forestry are discussed.

    References

    1. Appanah, S. (1985) General flowering on the climax rain forests of South-east Asia. J. Trop. Ecol. 1:225–240.CrossRef
    2. Appanah, S. & Chan, H. T. (1981) Thrips: the pollinators of some dipterocarps. Malay. For. 44: 234–252.
    3. Ashton, P. S., Givnish, T. J. & Appanah, S. (1988) Staggered flowering in the Dipterocarpaceae: new insights into floral induction and the evolution of mast fruiting in the aseasonal tropics. Am. Nat. 132: 44–66.CrossRef
    4. Barrett, S.H & Kohn, J.R. (1991) Genetic and evolutionary consequences of small population size in plants: implications for conservation. In Falk, D. A. & Holsinger, K. E. (eds). Genetics and Conservation of Rare Plants. Oxford University Press, New York, pp.3–30.
    5. Bawa, K. S. (1992) Mating system, genetic differentiation and speciation in tropical rain forest plants. Biotropica 24: 250–255.CrossRef
    6. Bawa, K. S. (1998) Conservation of genetic resources in the Dipterocarpaceae. In Appanah, A. & Turnbull, J. M. (eds). A Review of Dipterocarps: Taxonomy, Ecology and Silviculture. Center for International Forestry Research, Bogor, Indonesia, pp.45–55.
    7. Becker, P., Leighton, M., Payne, J. B. (1995) Why tropical squirrels carry seeds out of source crowns. J. Trop. Ecol. 1: 183–186.CrossRef
    8. Chase, M. R., Moller, G, Kesseli, R. & Bawa, K. S. (1996) Distant gene flow in tropical trees. Nature 383: 398–399.CrossRef
    9. Dayanandan, S., Attygalla, D. N. C, Abeygunaskera, A. W. W. L., Gunatilleke, I. A. U. N. & Gunatilleke, C. V. S. (1990) Phenology and floral morphology in relation to pollination of some Sri Lankan dipterocarps. In Bawa, K. S. & Hadley, M. (eds). Reproductive ecology of tropical forest plants, Man and the biosphere series, vol. 7. UNESCO, Paris and Parthenon Publishing Group, Carnforth, pp. 103–133.
    10. Dayanandan, S., Bawa, K. S. & Kesseli, R. (1997) Conservation of micTOsatellite among tropical trees (Leguminosae). Am. J. Bot. 84:1658–1663.PubMedCrossRef
    11. Dayanandan, S., Dole, J., Bawa, K. S. & Kesseli, R. (1999) Population structure delineated with microsatellite markers in fragmented populations of a tropical tree, Carapa guianensis (Meliaceae). Mol. Ecol. 8:1585–1592.PubMedCrossRef
    12. Doligez, A. & Joly, H. I. (1997) Mating system of Carapa procera (Meliaceae) in the French Guiana tropical forest. Am. J. Bot. 84: 461–470.PubMedCrossRef
    13. Dow, B.D. & Ashley, M. V. (1996) Microsatellite analysis of seed dispersal and parentable of sapling in bur oak, Quercus macroptera. Mol. Ecol. 5: 615–627.CrossRef
    14. Fisher, D. & Bachmann, K. (1998) Microsatellite enrichment in organisms with large genomes (Allium cepa L.). Biotropica 24: 796–804.
    15. Ghazoul, J., Liston, K. A. & Boyle, T. J. B. (1998) Disturbance-induced density-dependent seed set in Shorea siamensis (Dipterocarpaceae), a tropical forest tree. J. Ecol. 86:462–473.CrossRef
    16. Hall, P., Walker, S. & Bawa, K. S. (1996) Effect of forest fragmentation on genetic diversity and mating system in tropical tree, Pithecellobiwn elegans. Conserv. Biol. 10: 757–768.CrossRef
    17. Hamilton, M. B. (1999) Tropical tree gene flow and seed dispersal. Nature 401:129–130.CrossRef
    18. Iwata, H., Konuma, A. & Tsumura, Y. (2000) Development of microsatellite markers in the tropical tree Neobalanocarpus heimii (Dipterocarpaceae). Mol. Ecol. 9:1684–1685PubMedCrossRef
    19. Kajita, T., Kamiya, K., Nakamura, K., Tachida, H., Wickneswari, R., Tsumura, Y, Yoshimaru, H. & Yamazaki, T. (1998) Molecular phylogeny of Dipetrocarpaceae in Southeast Asia based on nucleotide sequences of matK, trnL intron, and trnL-trnF intergenic spacer region in chloroplast DNA. Mol. Phylogenet. Evol. 10: 202–209.PubMedCrossRef
    20. Kaur, A., Ha, C. O., Jong, K., Sands, V. E., Chan, H. T., Soepadmo, E. & Ashton, P. S. (1978) Apomixis may be widespread among trees of the climax rain forest. Nature 271: 440–442.CrossRef
    21. Kitamura, K., Rahman, M. Y B. A., Ochiai, Y & Yoshimaru, H. (1994) Estimation of the outcrossing rate on Dryobalanops aromatica Gaertn. f. in primary and secondary orests in Brunei, Borneo, Southeast Asia. Plant Species Biol. 9: 37–41.CrossRef
    22. Konuma, A., Tsumura, Y., Lee, C. T., Lee, S. L. & Okuda, T. (2000) Estimation of gene flow in the tropical-rainforest tree Neobalanocarpus heimii (Dipterocarpaceae), inferred from paternity analysis. Mol. Ecol. 9: 1843–1852.PubMedCrossRef
    23. Lee, S. L. (2000) Mating system parameters of Dryobalanops aromatica Gaertn. F. (Dipterocarpaceae) in three different forest types and a seed orchard. Heredity 85: 338–345.PubMedCrossRef
    24. Lee, S. L., Wickneswar, R., Mahani, M. C. & Zakari, A. H. (2000) Mating system paramerters in a tropical tree species, Shorea leprosula Miq. (Dipterocarpaceae) from Malaysian lowland dipterocarp forest. Biotropica 32: 693–702.CrossRef
    25. Lench, N. J., Nords, A., Bailey, A., Booth, A. & Markham, A.F. (1996) Vectorette PCR isolation of microsatellite repeat sequences using anchored dinucleotide repeat primers. Nucl. Acid Res. 24: 2190–2191.CrossRef
    26. Loveless, M. D. (1992) Isozyme variation in tropical trees: patterns of genetic organization. In Adams, W. T., Strauss, S. H., Copes, D. L. & Griffin, A. R. (eds). Population genetics of forest trees, Kluwer Academic Publishers, Netherlands, pp.67–94.CrossRef
    27. Momose, K., Yumoto, T., Nagamitsu, T., Kato, M., Nagamasu, H., Sakai, S., Harrison, R. D., Itioka, T., Hamid, A A & Inoue, T. (1998) Pollination biology in a lowland dipterocarp forest in Sarawak, Malaysia. I. Characteristics of the plant-pollinator community in a lowland dipterocarp forest. Am. J. Bot. 85: 1477–1501.PubMedCrossRef
    28. Murawski, D. A. & Bawa, K. S. (1994) Genetic structure and mating system of Stemonoporus oblongifolius(Dipterocarpaceae) in Sri Lanka. Am. J. Bot. 81:155–160.CrossRef
    29. Murawski, D. A. & Hamrick, J. L. (1991) The effect of the density of flowering individuals on the mating systems of nine tropical tree species. Heredity 67: 167–174.CrossRef
    30. Murawski, D. A. & Hamrick, J. L. (1992) The mating system of Cavanillesia platanifolia under extremes of flowering-tree density: a test of predictions. Biotropica 24: 99–101.CrossRef
    31. Murawski, D. A & Hamrick, J. L. (1994) Genetic structure and mating system of Stemonoporus oblongifolius(Dipterocarpaceae) in Sri Lanka. Am. J. Bot. 81: 155–160.CrossRef
    32. Murawski, D. A., Hamrick, J. L., Hubell, S. P. & Foster, R. B. (1990) Mating systems of two Bombacaceous trees of a neotropical moist forest. Oecologia 82:501–506.CrossRef
    33. Murawski, D. A, Gunatilleke, I. A. U. N. & Bawa, K. S. (1994) The effect of selective logging on inbreeding in Shorea megistophylla (Dipterocarpaceae) from Sri Lanka. Conserv. Biol. 8:997–1002.CrossRef
    34. Nagamitsu, T., Ichikawa, S., Ozawa, M., Shimamura, R., Kachi, N., Tsumura, Y & Muhammad, N. (2001) Microsatellite analysis of the breeding system and seed dispersal in Shorea leprosula (Dipterocarpaceae) Int. J. Plant Sei. 162:155–159.
    35. Nason, J. D. & Hamrick, J. L. (1996) Reproductive and genetic consequences of forest fragmentation: two case studies of Neotropical canopy trees. J. Hered. 8: 264–274.
    36. Nason J. D., Herre, E. A & Hamrick, J. L. (1998) The breeding structure of a tropical keystone plant resource. Nature 391: 687–689.CrossRef
    37. Obayashi, K., Tsumura, Y, Ihara-Ujino, T., Niiyama, K., Tanoushi, H., Suyama, Y, Washitani, I., Lee, C.-T., Lee, S. N. & Nuhammad, N. (2002) Genetic diversity and outcrossing rate between undisturbed and selectively logged forests of Shorea curtisii (Dipterocaropaceae) using microsatellite DNA analylsis. Int. J. Plant Sei. 163:151–158.CrossRef
    38. Slatkin, M. (1985) Gene flow in natural populations. Annu. Rev. Ecol. Syst. 16: 393–430.CrossRef
    39. Soepadmo, E. (1989) Contribution of reproductive biological studies towards the conservation and development of Malaysian plant genetic resources. In Zakri, A. H. (ed). Genetic Resources of Under-utilised Plants in Malaysia. Malaysian National Committee on Plant Genetic Resources. Kuala Lumpur, pp. 1–41.
    40. Tsumura, Y, Kawahara, T., Wiekneswari, R. & Yoshimura, H. (1996) Molecular phylogeny of dipterocarpaceae in Southeast Asia using RFLP of PCR-amplified chloroplast genes. Theor. Appl. Genet. 93: 22–29.CrossRef
    41. Ujino, T., Kawahara, T., Tsumura, Y, Nagamitsu, T., Wiekneswari, R. & Yoshimaru, H. (1998) Development and polymorphism of simple sequence repeat DNA markers for Shorea curtisii and other Dipterocarpaceae species. Heredity 81: 422–428.PubMedCrossRef
    42. Wang, T., Hagqvist, R., Tîgerstedt, P. M. A. (1999) Inbreeding depression in three generations of selfed families of silver birch (Betula pendula). Can. J. For. Res. 29: 662–668.

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    http://link.springer.com/chapter/10.1007/978-4-431-67008-7_21

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